Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMFGYSMVQMVRANAHKLDWPLRETVLQLYKPFKWTPCFLHKFFETKLQNRKKMSVIIEFEEGCHETGFQMAGEVLQKEKRSKLKSRFNKINCCSAEVTPSALHSLLSECSNIRKVYLNREVKALLDTATEASHAKEVVRNGQTLTGKGVTVAVVDTGIYP-HPDLEGRIIGFADMVNQKTEPYDDNGHGTHCAGDVASSGASSSGQYRGPAPEANLIGVKVLNKQGSGTLADIIEGVEWCIQYNEDNPDEPIDIMSMSLGGDALRYDHEQEDPLVRAVEEAWSAGIVVCVAAGNSG--PDSQTIASPGVSEKVITVGALDDNNTASSDDDTVASFSSRGPTVYGKEKPDILAPGVNIISLRSPNSYIDKLQKSSRVGSQYFTMSGTSMATPICAGIAALILQQNPDLTPDEVKELLKNGTDKWKDEDPNIYGAGAVNAENSVPGQ
2SEC Chain:E ((19-270))---------------------------------------------------------------------------------------------------------------------------------------------QGFKGANVKVAVLDTGIQASHPDL--NVVGGASFVAGEAYNTDGNGHGTHVAGTVAA--LDNTTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATT-------NGMDVINMSLGGA------SGSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSNSNR-------ASFSSVGAEL------EVMAPGAGVYSTYPTNTYA--------------TLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLGSSF--YYGKGLINVE------


General information:
TITO was launched using:
RESULT:

Template: 2SEC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1727 -168178 -97.38 -675.41
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain E : 0.71

3D Compatibility (PKB) : -97.38
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.624

(partial model without unconserved sides chains):
PDB file : Tito_2SEC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2SEC-query.scw
PDB file : Tito_Scwrl_2SEC.pdb: