Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKILISMIAIVLSITLAACGSNHAAKNHSDSNGTEQVSQDTHSNEYNQTEQKAGTPHSKNQKKLVNVTLDRAIDGDTIKVIYNGKKDTVRYLLVDTPETKKPNSCVQPYGEDASKRNKELV-NSGKLQLEFDKGDRRDKYGRLLAYVYVDGKSVQETLLKEGLARVAYVYEPNTKYIDQFRLDEQEAKSDKLSIWSKSGYVTNRGFNGCVK
4DF7 Chain:A ((12-135))-------------------------------------------------------------------ATLIKAIDGDTLKLMYKGQPMTFRLLLVDTPEFN------EKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMINEALVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWS---------------


General information:
TITO was launched using:
RESULT:

Template: 4DF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 614 -53941 -87.85 -438.54
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -87.85
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_4DF7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DF7-query.scw
PDB file : Tito_Scwrl_4DF7.pdb: