Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSKEKKSVTILTESQLSSRAFKDEAYEFYKELRKSQALYPLSLG-ALGKGWLISRYDDAIHLLKNEKLKKNYENVFTAKEKRPALLKNEETLTK--HMLNSDPPDHNRLRTLVQKAFTHRMILQLEDKIQHIADSLLDK-VQPNKFMNLVDDYAFPLPIIVISEMLGIPLEDRQKFRVWSQAIIDFSDAPERLQ--ENDHLLGEFVEYLESLVRKKRREPAGDLISALIQAESEGTQLSTEELYSMIMLLIVAGHETTVNLITNMTYALMCHHDQLEKLRQQPDLMNSAIEEALRFHSPVELTT-IRWTAEPFILHGQEIKRKDVIIISLASANRDEKIFPNADIFDIERKNNRHIAFGHGNHFCLGAQLARLEAKIAISTLLRRCPNIQLKGEKKQMKWKGNFLMRALEELPISF
4XE3 Chain:B ((31-407))-----------------------------YAELRRDEPVSRVRLPYGEGTAWLVTRMSDARIVLGDSRFS-------TAAATDPATPRMFPTPPEPDGVLAQDPPDHTRLRRLVGKAFTARRVEEMRPRVRSLVDSLLDDMVAHGSPADLVEFLAVPFPVAVICELLGVPLEDRDLFRTFSDAMLSST----RLTAAEIQRVQQDFMVYMDGLVAQRRDAPTEDLLGALALATDNDDHLTKGEIVNMGVSLLIAGHETSVNQITNLVHLLLTERKRYESLVADPALVPAAVEEMLRYTPLVSAGSFVRVATEDVELSTVTVRAGEPCVVHFASANRDEEVFDHADELDFHRERNPHIAFGHGAHHCIGAQLGRLELQEALSALVRRFPTLDLAEPVAGLKWKQGMLIRGLERQIVSW


General information:
TITO was launched using:
RESULT:

Template: 4XE3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1762 9102 5.17 24.60
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : 5.17
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_4XE3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XE3-query.scw
PDB file : Tito_Scwrl_4XE3.pdb: