Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNHLQLKKLLNHFFLEDIGTGDLTSQSIFGEQSCEAEIVAKSEGIFAGAAIIKEGFSLLDENVQSILHKKDGDMLHKGEVIAELHGPAAALLSGERVVLNLIQRLSGIATMTREAVRCLDDEQIK--ICDTRKTTPGLRMLEKYAVRAGGGYNHRFGLYDGIMIKDNHIAACGSILEACKKARQAAGHMVNIEVEIETEEQLREAIAAGADVIMFDNCPPDTVRHFAKLTPANIKT---EASGGITLESLPAFKGTGVNYISLGFLTHSVKSLDISMDVTLSNESVEECCYVNS
4I9A Chain:B ((36-285))---------------------------VTGAAPSQAVLWAKSPGILAGRPFFDAIFAQVNCQVSWFL--PEGSKLVPVAKVAEVRGPAHCLLLGERVALNMLARCSGVASAAATAVETARGTGWAGHVAGTRKTTPGFRLVEKYGLLVGGATSHRYDLGGLVMVKDNHVVAAGGVKQAVQGARRAANFALKVEVECSSLQEALEAAEAGADLVLLDNFRPEELHPTAAALKAQFPTVGVEASGGVTLDNLPQFCGPHIDVISLGMLTQAAPALDFSLKL---------------


General information:
TITO was launched using:
RESULT:

Template: 4I9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1290 -42141 -32.67 -172.00
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -32.67
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_4I9A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4I9A-query.scw
PDB file : Tito_Scwrl_4I9A.pdb: