Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSVMSHEFQLATAETWPNPWPMYRALRDHDPVHHVVPPQRPEYDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLHDTPPMVMQDPPVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRA--NGGGDIVTELFKPLPSMVVAHYLGVPEEDWTQFDGWTQAIVAANAVDGATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEELLRLTSPVQGLA-RTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPD--FEVAESRIVWSGGSYVRRPLSVPFRVTS |
| 3ZPI Chain:A ((47-424)) | ------------------DPYPTYARLRAEGPAHRVRTPEGNEV--WLVVGYDRARAVLADPRFSKDWRNSTTPLTEAEAALNHN---MLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVISELLGVPEPDRAAFRVWTDAFVFPDDPAQAQT----AMAEMSGYLSRLIDSKRGQDGEDLLSALVRTS-DEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERF-PDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198501 for 3097 contacts (-64.1/contact) +
2D Compatibility (PS) -40183 + (NN) -19800 + (LL) 1788
1D Compatibility (HY) -23600 + (ID) 6200
Total energy: -286496.0 ( -92.51 by residue)
QMean score : 0.429
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