Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSLDNTADEKPAIDPILLKVLDAVPFRLSIDDGIEAVRQRLRDLPRQPVHPELRVVDLAIDGPAG-PIGTRIYWPPTCPDQAEAPVVLYFHGGGFVMGDLDTHDGTCRQHAVGADAIVVSVDYRLAPEHPYPAAIEDAWAATRWVAEHGRQVGADLGRIAVAGDSAGGTIAAVIAQRARDMGGPPIVFQLLWYPSTLWDQSLPSLAENADAPILDVKAIAAFSRWYAGEIDLHNPPAPMAPGRA--ENLADLPPAYIAVAGYDPLRDDGIRYGELLAAAGVPVEVHNAQTLVHGYVGYAG--VVPAATEATNRGLVALRVVLHG |
| 4V2I Chain:A ((25-315)) | ---------------------------TLTPAEARDVLSGAQSGE---IAKPAVDITDTTFAVGPTGATKVRIIRPQGN--TDRLPVIVYFHGAGWVMGDTGTHDRLVRELSVRANAALVFVDYERSPEARYPVAIEQDYAVTKYVAEHSEQLNVDPTRLAIAGDSVGGNMTAVVSLLAQERGGPDITAQVLFYPVTDADFDNGSYTEFANGPWLTKPAMDWFWNQYLPEGIDR-TDPKITPIHATSEQLSGQAPALVITAENDVLRDEGEAYARKLSQAGVDVTVTRYNGTIHDFVMLNVLADTPAAKGAIAQAGQYLHTALH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206333 for 2593 contacts (-79.6/contact) +
2D Compatibility (PS) -31171 + (NN) -19988 + (LL) 1192
1D Compatibility (HY) -9200 + (ID) 5050
Total energy: -270550.0 ( -104.34 by residue)
QMean score : 0.550
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