Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRL-------------AADGHKVAVTHRGSGAPKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH
4BNZ Chain:B ((31-268))
------------------LVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGA--GLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRD--------DEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVV-----AGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM--
General information:
TITO was launched using:
RESULT:
Template:
4BNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114108 for 1646 contacts (-69.3/contact) +
2D Compatibility (PS) -23036 + (NN) -8180 + (LL) 2364
1D Compatibility (HY) -17600 + (ID) 4650
Total energy: -165210.0 ( -100.37 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_4BNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BNZ-query.scw
PDB file :
Tito_Scwrl_4BNZ.pdb
: