Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTPGEDHAGSFYLPRLEYSTLPMAVDRGVGWKTLRDAGPVVF-----MNGWYYLTRREDVLAALRNPKVFSSRKALQ-PP--GNPLPVVPLAFDPPEHTRYRRILQPYFSPAALSKALPSLRRHTVAMIDAIAGR-GECEAMADLANLFPFQLFLVLYGLPLEDRDRLIGWKDAVIAMSDRPHPTEADVAAARELLEYLTAMVAERRRNPGPDVLSQVQI---GEDPLSEIEVLGLSHLLILAGLDTVTAAVGFSLLELARRPQLRAMLRDNPKQIRVFIEEIVRLEPSAPV-APRVTTEPVTVGGMTLPAGSPVRLCMAAVNRDGSDAMSTDELVMDGKVHRHWGFGGGPHRCLGSHLARLELTLLVGEWLNQIPDFELAPDYAPEIRF-PSKSF-ALKNLPLRWS |
4MM0 Chain:A ((18-399)) | ----------------------AVPTAIPPLYEELRETERVAAITMATGDPGFLVTRYEDVRFVLSDPR-FSVRQDLPGAPRLTEMTFESVMTTDPPVHTRLRRLLSRDFTARRIERMRPRLEEIAEGLLDEMEKKGAPADIVESLAVPFPITVICELLGVPMVDVARFRGWADTMVSLTGY--SMEDWTAARDALESYLDGLVAAKRENPGSDLLSALVATAAEDNELTDHDVRSLSLILLLAGYEPASNQLGSSVLTLLRFPDRLAELRRDPGLLPSAVEELMRYAPAGDGALFRVTLEDVTIGDTHIPANSAVLASTQAANWDPRRFDDPTGLRLDRPDNQHTALGHGIHFCLGAALARVELQVAIGALLRRFPRLALATDESGLRWSSPGSMLSGFAEIPVTW- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202343 for 2946 contacts (-68.7/contact) +
2D Compatibility (PS) -40369 + (NN) -35435 + (LL) 1016
1D Compatibility (HY) -18000 + (ID) 5700
Total energy: -300831.0 ( -102.12 by residue)
QMean score : 0.564
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