Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAVVKSVALAGRPTTPDRVHEVLGRSMLVDGLDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFET---RPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQVC----GVM-AGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTADRDELIRQLWQRAVIVLPAG--ADTVRFRPPLTVSTAEIDAAIAAVRSALPVVT |
| 4UOX Chain:A ((64-452)) | ----------------------------------GAVEWQAGSLNTLVDT-QGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQP-L--HSQ---ELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPR---------GKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLL----PGFR--HVPF----------GNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD---NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALAAM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221023 for 3392 contacts (-65.2/contact) +
2D Compatibility (PS) -41435 + (NN) -20260 + (LL) 4644
1D Compatibility (HY) -19200 + (ID) 5300
Total energy: -302574.0 ( -89.20 by residue)
QMean score : 0.483
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