Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLAEAADAINFGLAGRVVLVTGGVRGVGAGISSVFAEQGATVITC----AR-------RAVDGQPYEFHRCDIRDEDSVKRLVGEIGERHGRLDMLVNNAGGSPYALAAEATHNFHRKIVELNVLAPLLVSQHANVLMQAQPNGGSIVNICSVSGRRPTPGTAAYGAAKAGLENLTTTLAVEWAPK-VRVNAVVVGMVETERSELFYGDAESIARVAATVPLGRLARPADIGWAAAFLASDAASYISGATLEVHGGGEPPPYLGASSANK |
4NBV Chain:A ((3-243)) | -------------LQGRVAIITGAAAGIGFATAQRFAEDGAIVVLCDVQEARVREAAARLAATGATVSAYRVDVTRRDEVDAMVAAVLAAHQRVDILVNNAGITKDARLAKMTEAQFDAVIDVNLKGVFNCAQAVAGLMTEQGK-GVILNASSVVGLYGNFGQTNYAASKFGVIGFTKTWARELGPKGVRVNAVCPGFVNTEILQTV--PDKVLDGMTSSCWLRRLAEPAEIASIYAFLASDDASYVNGVAIEASGG-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NBV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136295 for 1926 contacts (-70.8/contact) +
2D Compatibility (PS) -25073 + (NN) -11724 + (LL) 696
1D Compatibility (HY) -14000 + (ID) 4400
Total energy: -190796.0 ( -99.06 by residue)
QMean score : 0.555
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