Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVSSASLAGKVAFVQGGSRGIGAAIVRRLAAEGASVA---------FTYVS-SADKSRALAAELEGAGASILALHADSADAAALVAAVDEAAARFGRIDILVNNAAVLALGSVEELPLADFERTLAINVRSVFVATQAAVKHM---GDGGRVISIGSTNAER-MPFAGGATYAMSKSALVGLTKGLARDLGPRGITVNNVQPGPVDTDM---------------NPDDGDFAEALKGLMALP-RYARSEEIASFVAYLAGPEAAYITGASLTIDGGFSA |
3OEC Chain:D ((44-312)) | -------LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP--GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OEC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117341 for 1953 contacts (-60.1/contact) +
2D Compatibility (PS) -26449 + (NN) -16472 + (LL) 708
1D Compatibility (HY) -13200 + (ID) 4900
Total energy: -177654.0 ( -90.96 by residue)
QMean score : 0.634
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