Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARPLAMIAALGENRAIGIDNRLPWRLPADLKHFKAMTLGKPVIMGRKTWDSLGRPLPGRLNLVVSRQAGLALEGAEVFASLDAALARAEAWAQAEDADELMLIGGAQLYAEALPRAARLYLTRVGLAPEGDAFFPEIDGAAWRLASSIEHAAADDAP--AYAFEVWERR
3JWK Chain:A ((9-167))----VSFMVAMDENRVIGKDNNLPWRLPSELQYVKKTTMGHPLIMGRKNYEAIGRPLPGRRNIIVTRNEGYHVEGCEVAHSVE------EVFELCKNEEEIFIFGGAQIFDLFLPYVDKLYITKIHHAFEGDTFFPEMDMTNWK-EVFVEKGLTDEKNPYTYYYHVYEKQ


General information:
TITO was launched using:
RESULT:

Template: 3JWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96907 for 1144 contacts (-84.7/contact) +
2D Compatibility (PS) -16550 + (NN) -1036 + (LL) 1340
1D Compatibility (HY) -16000 + (ID) 3300
Total energy: -132453.0 ( -115.78 by residue)
QMean score : 0.475

(partial model without unconserved sides chains):
PDB file : Tito_3JWK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JWK-query.scw
PDB file : Tito_Scwrl_3JWK.pdb: