Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGA--PQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFP--PSADPLRQLARYIVERRN |
3PDE Chain:A ((9-299)) | --IAFEDQWVPALNAPLKQAILAD-SQDAQLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLP---ATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAP-EAQWPAYLQFADAFGLAFQIYDDILDVVSS-----------ADEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFDTER- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125320 for 2283 contacts (-54.9/contact) +
2D Compatibility (PS) -30555 + (NN) -26436 + (LL) 924
1D Compatibility (HY) -22000 + (ID) 5800
Total energy: -209187.0 ( -91.63 by residue)
QMean score : 0.504
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