Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSTIHPLPSFGLGTFRLTGQVVVDSVRSALELGYRAIDTAQIYGNEADIGRAIAES----GVPRSELFLTTKVWVDNYAREKLLASLRESLEKLRTDRLDLVLIHWPA---PG--------------NGVELGEYMAALAEAKSLGLTRRIGVSNFNIELTRQAIAAVGAG-EISTNQIELSPYLQNRALTAYLEEQGIAVTSYMTLA-----YGK-----VLKDPTLAGIAARHRATVAQVALAWAMQLGYAVIPSSTRRENLASNLLARDLRLDAEDMARIAGLERNGREVSPQGLAPAWD |
1IEI Chain:A ((13-297)) | -------MPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWR------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -134421 for 2046 contacts (-65.7/contact) +
2D Compatibility (PS) -26601 + (NN) -2008 + (LL) 792
1D Compatibility (HY) -21200 + (ID) 4800
Total energy: -188238.0 ( -92.00 by residue)
QMean score : 0.511
|
|
|