Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLA-ALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
2OKE Chain:C ((22-131))
-------------------PTRQSPGAAGYDLYSAY--DYTIPPGERQLIKTDISMSM--PKFCYGRIAPRSGLSLK-GIDIGG--GVIDEDYRGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELEEVQSL----------------
General information:
TITO was launched using:
RESULT:
Template:
2OKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78521 for 687 contacts (-114.3/contact) +
2D Compatibility (PS) -11827 + (NN) -4171 + (LL) 1376
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -103243.0 ( -150.28 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_2OKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OKE-query.scw
PDB file :
Tito_Scwrl_2OKE.pdb
: