Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLAVLGTGMIVKEVLPVLQKIE--GIDLVAILSTVRSLETAKDLAKEYNMSLATSEYKAVLDNEEIDTVYIGLPNHLHFDYAKEALLAGKHVICEKPFTLEASQLEELVSIANTRQLILLEAITNQYLPNFDLVKEHLS--NLGDIKIVECNYSQYSSRYDAFKRGEIAPAFNPEMGGGALRDLNIYNLHLVIGLFGE--PITAQYLPNIE-RGIDTSGVLVLDYGHF-KTVCIGAKDCSAEVKSTIQGDKGSIAILGPTNTMPKISLTMNGQES--H---VYQLNGDRHRMHDEFVIFEGIISNLDFKRAAQALEHSRTVMKVLDMVTK |
3OHS Chain:X ((3-323)) | LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR--DLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQGTLGDLRVARAEFGKNLTHV--------PRAVDWAQAGGALLDLGIYCVQFISMVFGGQKPEKISVMGRRHETGVDDTVTVLLQYPGEVHGSFTCSITAQLSNTASVSGTKGMAQLLNPCWCPTELVVKGEHKEFLLPPVPKNCNFDNGAGMSYEAKHVRECLRKGLKESPVIPLVESELLADILEEVRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187259 for 2729 contacts (-68.6/contact) +
2D Compatibility (PS) -32524 + (NN) -11550 + (LL) 792
1D Compatibility (HY) -13600 + (ID) 3400
Total energy: -247541.0 ( -90.71 by residue)
QMean score : 0.473
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