Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGNEVHPDLRRIAVVTPRQLVGPRTLPVMRALIVVAGLRMSRTPPDIEVLTLESGVGVRLYRPAGSNEPAPALLWIHAGGYVMGTAQQDDRLCLRFSSRLG-ITVASVDYRLAPENPYPAALGDCYSALTWLASLP---AVDPARVAIGGASAGGGLAAALALLARDRGGITPAFQLLVYPMLDDRPSIAPANP--H--YRLWNGRANRFGWRAYLGDA---DARVAVPGRRDDLGGLAPAWIGVGTHDLLHDEDLAYAERLTAAGVPCQVEVVEGAFHGFDRVAPNVGVSQRFFTSQCNSLRAALALSNRT |
2HM7 Chain:A ((58-309)) | ------------------------------------------------------RTLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKD-GRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HM7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150234 for 2171 contacts (-69.2/contact) +
2D Compatibility (PS) -26236 + (NN) -16612 + (LL) 4716
1D Compatibility (HY) -15200 + (ID) 4800
Total energy: -208366.0 ( -95.98 by residue)
QMean score : 0.519
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