Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVCAAFSGGAGASDAGALLEAARRGDTAQVASLLERKVEVDAPSADGSTPLLLATANDHLAVARQLIEAGADVNRQNSRLDSPYLLAGAEGRLEILRLTLLHGADLKSTNRYGGTALIPACERGHVEVVKTLLQAGVDPNHVNKLGWTGLLEAILLSDGGPRHQEIVRLLIDAGADVNLADADGVSPLAHARQRGQGGIERLLLAAGAQ
4QFV Chain:A ((9-182))
------------------LLEAARAGHDDSVEVLLKKGADINAKDNSGRTPLHVAALNGHLELVKLLLEKGADINARDMFGLTPLHTAASNGHLELVKLLLEKGADINARDEDGSTPLHLAASNGHLELVKLLLEKGADINAEDHSGTTPLHFAAKNG-----HLELVKLLLEKGADINASDFSGPTPLHSAAENGH-------------
General information:
TITO was launched using:
RESULT:
Template:
4QFV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75251 for 1450 contacts (-51.9/contact) +
2D Compatibility (PS) -19824 + (NN) -16292 + (LL) 1320
1D Compatibility (HY) -6000 + (ID) 3400
Total energy: -119447.0 ( -82.38 by residue)
QMean score : 0.708
(partial model without unconserved sides chains):
PDB file :
Tito_4QFV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QFV-query.scw
PDB file :
Tito_Scwrl_4QFV.pdb
: