Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQMPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
3WA4 Chain:A ((3-98))
--------------------------------------------------------PEFWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIE-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WA4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59472 for 661 contacts (-90.0/contact) +
2D Compatibility (PS) -10378 + (NN) -6730 + (LL) 6200
1D Compatibility (HY) -13200 + (ID) 4700
Total energy: -88280.0 ( -133.56 by residue)
QMean score : 0.266
(partial model without unconserved sides chains):
PDB file :
Tito_3WA4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WA4-query.scw
PDB file :
Tito_Scwrl_3WA4.pdb
: