Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
2ATX Chain:A ((17-194))
-LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP------------
General information:
TITO was launched using:
RESULT:
Template:
2ATX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134070 for 1407 contacts (-95.3/contact) +
2D Compatibility (PS) -19194 + (NN) -9722 + (LL) 932
1D Compatibility (HY) -24400 + (ID) 6200
Total energy: -192654.0 ( -136.93 by residue)
QMean score : 0.691
(partial model without unconserved sides chains):
PDB file :
Tito_2ATX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ATX-query.scw
PDB file :
Tito_Scwrl_2ATX.pdb
: