Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLP-SRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
3OES Chain:A ((23-188))
-RYRKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVT----EFHLHLVDTAGQDEYSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHE-----RVPVVLVGNKADLSPEREVQAVEGKKLAESWGATFMESSARENQLTQGIFTKVIQEIARV-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3OES.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94902 for 1280 contacts (-74.1/contact) +
2D Compatibility (PS) -16826 + (NN) -2419 + (LL) 2496
1D Compatibility (HY) -15200 + (ID) 2750
Total energy: -129601.0 ( -101.25 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_3OES.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OES-query.scw
PDB file :
Tito_Scwrl_3OES.pdb
: