Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPG--------EEVIPKDENGKILFD-TVDLCATWEAMEKC---KDAGLAKSIGVSNFNHRLLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGL-NRN-VRYLTLDIFAGPPNYPFSDEY |
| 4IJR Chain:A ((22-334)) | ----EIYFSLNNGVRIPALGLGTANPH-EKLAETKQAVKAAIKAGYRHIDTAWAYETEPFVGEAIKELLEDGSIKREDLFITTKVWPVLW--DEVDRSLNESLKALGLEYVDLLLQHWPLCFEKIKDPKGISGLVKTPVDDSGKTMYAADGDYLETYKQLEKIYLDPNDHRVRAIGVSNFSIEYLERLIKECR--VKPTVNQVETHPHLPQMELRKFCFMHDILLTAYSPLGSHG--------AP-NLKIPLVKKLAEKYNVTGNDLLISYHIRQGTIVIPRSLNPVRISSSIEFA--SLTKDELQELNDFGEKYPVRFIDEPFAAILPEFTG---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -200685 for 2546 contacts (-78.8/contact) +
2D Compatibility (PS) -32908 + (NN) -23363 + (LL) 1112
1D Compatibility (HY) -21200 + (ID) 5500
Total energy: -282544.0 ( -110.98 by residue)
QMean score : 0.631
|
|
|