Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | AHNIVLYTGAKMPILGLGTWKSPPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLALQAKLQEQVVKREDLFIVSKLWCTYHDKDLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKDFFPLDEDGNVIPSEKDFVDTWTAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQIECHPYLTQEKLIQYCNSKGIVVTAYSPLGSPDRPWAKPEDPSILEDPRIKAIADKYNKTTAQVLIRFPIQRNLIVIPKSVTPERIAENFQVFDFELDKEDMNTLLSYNRDWRACALVSCASHRDYPFHEEF |
| 1VP5 Chain:A ((16-281)) | -PKVTLNNGVEMPILGYGVFQIPPEKTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDVGYESTKKAFEKSLKKLQLEYIDLYLIHQPF---------------------GDVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHE--IVPAVNQIEIHPFYQRQEEIEFMRNYNIQPEAWGPFAEGR--------KNIFQNGVLRSIAEKYGKTVAQVILRWLTQKGIVAIPKTVRRERMKENISIFDFELTQEDMEKIATLDEGQSAF----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171913 for 2317 contacts (-74.2/contact) +
2D Compatibility (PS) -28790 + (NN) -15275 + (LL) 1820
1D Compatibility (HY) -24400 + (ID) 5400
Total energy: -243958.0 ( -105.29 by residue)
QMean score : 0.610
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