Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE
2VTN Chain:A ((4-287))-----FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-----------PSTAIREISLLKELN---HPNIVKLLDVIHT-----ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG---------------VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP


General information:
TITO was launched using:
RESULT:

Template: 2VTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163923 for 1991 contacts (-82.3/contact) +
2D Compatibility (PS) -27680 + (NN) -16672 + (LL) 1672
1D Compatibility (HY) -30400 + (ID) 6400
Total energy: -243403.0 ( -122.25 by residue)
QMean score : 0.563

(partial model without unconserved sides chains):
PDB file : Tito_2VTN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VTN-query.scw
PDB file : Tito_Scwrl_2VTN.pdb: