Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPHEPHEPLTPPFSALPDPAGAPSRRQSRQRPQLSSDSPSAFRASRSHSRNATRSHSHSHSPRHSLRHSPGSGSCGSSSGHRPCADILEVGMLLSKINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW-MQDVLLPQETAEIHLHSLSPGPSK |
| 4CQG Chain:A ((2-272)) | -----------------------------------------------------------------------------------------------------------------------KDYDELLKYYELYETIGTGGFAKVKLACHVLTGEMVAIKIMDKNALG--SDLP---RVKTEIDALKSLRH--QHICQLYHVLETKNKIFMVLEYC-PGGELFDYIISQDRLSEEETRVVFRQILSAVAYVHSQGYAHRDLKPENLLFDENH-KLKLIDFGLCAK---------CGSLAYAAPELIQG-----SEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYEVPKWLSPSSILLLQQMLQVDPKKRISMRNLLNHPWVMQDYSCPVEWQSKTPLTHLDEDCV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157239 for 1943 contacts (-80.9/contact) +
2D Compatibility (PS) -26642 + (NN) -15694 + (LL) 3748
1D Compatibility (HY) -24000 + (ID) 4700
Total energy: -224527.0 ( -115.56 by residue)
QMean score : 0.470
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