Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSNIRQLFYYIKPNLHYFIIAFIAVLSSALTILLFGRGLSNIIDSGAEHNFTTKLLVTIFIVLAISLTAFIRLYFIGIGSEKVIARIRYDLYGNITDLQPSFFENTSVQDVISALITDTSVLQSIMNSSLLTILRNFIILIGSVAMLLYTNLHLTTYAAAIIPMLLIIMTSLGKKVRNYARFAQNKLSELASFSEENFRSIVTIKSFVLEENEKIRFKEHLDSVSKSYVKLVFLRAILVTLVIACVIGSLVILLFFGIKEVLSNNITVGELSSFVFYSALAAGTVNNLSDNISDLQRGFGIVERLFEFKNMKSSIMDVDNPIKICGVKKGISFNGVTFFYESQPDKPALDNVSFSIETGQAVSIIGPSGSGKSTILKLLLRFHDPGKGSITIDGYNVKSIALSNLRSLFGLVPQDHIIFSCSIMENILYG-KPGAEYEEVRQAAISAYAMEFIEKLPDKFDTFVGKRGLKLSEGQKQRIIIARAILKNPQILILDEATSALDYKSENLVQKAL--SKLMQNRTTIMITHRLSTALKTDKVIVVNHGKVEEVGTHDSLMSKGGLYAKLTKI |
| 2IXF Chain:B ((10-255)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLNMKGL---VKFQDVSFAYPNHPNVQVLQGLTFTLYPGKVTALVGPNGSGKSTVAALLQNLYQPTGGKVLLDGEPLVQYDHHYLHTQVAAVGQEPLLFGRSFRENIAYGLTRTPTMEEITAVAMESGAHDFISGFPQGYDTEVGETGNQLSGGQRQAVALARALIRKPRLLILDQATSALDAGNQLRVQRLLYESPEWASRTVLLITHQLSLAERAHHILFLKEGSVCEQGTHLQLMERGGCYRSMVEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162974 for 1930 contacts (-84.4/contact) +
2D Compatibility (PS) -27069 + (NN) -15581 + (LL) 28512
1D Compatibility (HY) -17600 + (ID) 4400
Total energy: -199112.0 ( -103.17 by residue)
QMean score : 0.586
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