Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINKNEFLFLPLGGVGRIGMNVNLYHYRGKWIMIDLGIGFADETMPGIELLIADVSFIAQRKKDLLGIIITHAHEDHCGAVPYLWKELQCPIYTTKFTANFLKEKLKEFRLEGMVSVKEVDINGSINLSPFTVEFINVTHSIPEAHSILVSTDVG-SALHTGDWKFDQKPIVGLTSNISRLKEIGDKGNLLAAICDSTNVLGKHNPESESEIYNNIYNIIRRSKKL---VAVSLFASNVARIETIGQVAKVLGRKVVLLGRSLWRIVRVAQNSGYLTDSVEFCEVKDVADLPREKLLLICTGCQG----EPMAAISKLANKSHHA-FKMQQGDTVIFSSKIIPGNETRAHVIFNAFIEMGVEIVTEKTECVHASGHPVKAELREMYSLIKPKMSIPVH--GEYIHTHAHVKFAKECGVEKAIMIAPGDIVNLENGKKVDSINVNYFGVDGILLRHPGSNVIRMRKKMRDAGTIVVTAIVNKRNKLLAKPKVFAPGVLEAVEDAAIIQRIIKAVESAFNLQSTKKVRNKIESLIFSILKEYLLKRPIIEVQIEQV |
| 5AHR Chain:A ((1-343)) | -----------------------------------SMTCPFYK-KIPGTGFTVD--AFQYGVVEGCTAYFLTHFHSDHYAGLS---KHFTFPVYCSEITGNLLKNKLHVQEQY----IHPLPLDTECIVNGVKVVLLDANHC-PGAVMILFYLPNGTVILHTGDFRAD------PSMERSLLAD--QKVHMLYL--DTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGM--------------------SQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTVIP--QTKGNISIYGI---------------PYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRSTMEKYFREWKLEAGY------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125482 for 2498 contacts (-50.2/contact) +
2D Compatibility (PS) -33394 + (NN) -5892 + (LL) 17744
1D Compatibility (HY) -18000 + (ID) 3650
Total energy: -168674.0 ( -67.52 by residue)
QMean score : 0.383
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