Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKKALLELSNGLKIELPVLSGTMGYDVLNIKDLYKVTGLLTYDP---GFVSTASCSSAITFIDGDEGVLRYRGHDIADLAQSNDFTAVIYLLLYGKLPNLEQHKKFFLKIQELSKVPEQVVNVIKAFPKTAHPMSILIACFATLSALYHERYGN--NVSNENLDFGISAIAQVPAIIAMVYRHT-NDQEFIDTDNELNYSKSFLRMMFGNALDNDKSTLFAKALDKIFTLHADHEQNASTAAVRVVGSAGSNLFACLSAGVATLWGPVHGGANESVINMLKEIEQ-SGNVDKFIEKAKDDKDPFKLMGFGHRVYKNYDPRARILKDACDEILNKLEQDSKLLKIAKELEKIALKD--EYFVVRKLYPNVDFYSGIIMNAINIPPSMFTPIFALARTTGWVTQWYEMINDKETKICRPRQLYVGK------------ |
1AJ8 Chain:A ((1-371)) | ---------------------------------------------LAKGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAELSTFEEVVYLLWWGKLPSLSELENFKKELAKSRGLPKEVIEIMEALPKNTHPMGALRTIISYLGNIDDSGD--IPVTPEEVYRIGISVTAKIPTIVANWYRIKN-GLEYVPPKEKLSHAANFLYMLHGE----EPPKEWEKAMDVALILYAEHEINASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQFMEIG-SPEKVEEWFFKALQQKR--KIMGAGHRVYKTYDPRARIFKKYASKLGD-----KKLFEIAERLERLVEEYLSK----KGISINVDYWSGLVFYGMKIPIELYTTIFAMGRIAGWTAHLAEYVS--HNRIIRPRLQYVGEIGKKYLPIELRR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1AJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -226956 for 3035 contacts (-74.8/contact) +
2D Compatibility (PS) -37334 + (NN) -14352 + (LL) 3700
1D Compatibility (HY) -28000 + (ID) 6450
Total energy: -309392.0 ( -101.94 by residue)
QMean score : 0.597
|
|
|