Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMQQLSLKHRLNNGDSVYGIFNSIPDPLMIEVIAASGYDFVVIDTEHVAINDETLAHLIRAAEAAHIIPIVRVTAVIDRDIIKVLDMGARGIIVPHVKDRETVEHIVKLSRYYPQGLRSLN--GGRMARFGRTPLLDAMEMANEHIMVIAMIEDVEGVMAIDDIAQVEGLDMIVEGAADLSQSLGIPWQTRDDQVTSHVQHIFEVVNAHGKHFCALPREDE-DIAKWQAQGVQTFILGDDRGKIYRHLSASLATSKQKGDDG
2V5J Chain:A ((26-278))--MENSFKAALKAGRPQIGLWLGLSSSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNR--IPDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIA-NEQLAKRYLELGALFVAVGVDTTLLARAAEALAARFGAQ----


General information:
TITO was launched using:
RESULT:

Template: 2V5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181676 for 2054 contacts (-88.4/contact) +
2D Compatibility (PS) -26582 + (NN) -7388 + (LL) -64
1D Compatibility (HY) -8800 + (ID) 3200
Total energy: -227710.0 ( -110.86 by residue)
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_2V5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2V5J-query.scw
PDB file : Tito_Scwrl_2V5J.pdb: