Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLIIAEDQNMLRQAMVQLIKLHGDFEILADTDNGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYVLKERSIEELVETINKVNNGEKEYSATLMT------SFFVDKNPLTPKEQIVLREIGNGLSSKEISEKLFLTDGTVRNYTSVIIDKLFADNRFDAWKKANEKGWI
1A04 Chain:A ((8-215))
--TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL--ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI-
General information:
TITO was launched using:
RESULT:
Template:
1A04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83697 for 1552 contacts (-53.9/contact) +
2D Compatibility (PS) -21064 + (NN) -9686 + (LL) 568
1D Compatibility (HY) -13600 + (ID) 2800
Total energy: -130279.0 ( -83.94 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_1A04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A04-query.scw
PDB file :
Tito_Scwrl_1A04.pdb
: