Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKYRNVFIEAQNKAKQQKLNIWSK
4K2K Chain:A ((9-135))---------------------------------------------KEPATLIKAIDGDTVKAMYKGQPMTFRALLVDTPEF------NEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYAY-ADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWS-


General information:
TITO was launched using:
RESULT:

Template: 4K2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6417 for 992 contacts (-6.5/contact) +
2D Compatibility (PS) -13397 + (NN) -5186 + (LL) 3536
1D Compatibility (HY) -8000 + (ID) 2400
Total energy: -31864.0 ( -32.12 by residue)
QMean score : 0.479

(partial model without unconserved sides chains):
PDB file : Tito_4K2K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K2K-query.scw
PDB file : Tito_Scwrl_4K2K.pdb: