Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVTLINNENNARYEFETIECTRGPKAVDFSKLFETTGFFSYDPGYSSTAGCQSKISYINGKKGELYYRGHRIEDLVAKYK---YVDVCRLLLTGELPKNQDESLEFELELRHRSFVHESLLNMFSAFPSNAHPMAKLSSGVSILSTLYSTHQNM--HTEEDYQTMARRIVAKIPTLAAICYRNEVGAPIIYPDIARSYVENILFMLRGYPYSRLKHTTQGEVGITPLEVEAFDKILTLHADH-GQNASSTTVRNVASTGVHPYAAISAGISALWGHLHGGANEKVLLQLEEIGDVKNVDKYIARVKDKNDNFKLMGFGHRVYKSYDPRAKILKGLKDELHQKGVKMDERLSEIAAKVEEIALKD--EYFIERNLYPNVDFYSGTILRALKIPVRFFTPVFVIGRTVGWCAQLLEHVKSPQARITRPRQVYVGD------------ |
| 1AJ8 Chain:A ((1-371)) | -----------------------------------------LAKGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAE---LSTFEEVVYLLWWGKLP-SLSELENFKKELAKSRGLPKEVIEIMEALPKNTHPMGALRTIISYLGNIDDSGD--IPVTPEEVYRIGISVTAKIPTIVANWYRIKNGLEYVPPKEKLSHAANFLYMLHGEEPP-------------KEWEKAMDVALILYAEHE-INASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQFMEIGSPEKVEEWFFKALQQKR--KIMGAGHRVYKTYDPRARIFKKYASKLGD------KKLFEIAERLERLVEEYLSK----KGISINVDYWSGLVFYGMKIPIELYTTIFAMGRIAGWTAHLAEYVS--HNRIIRPRLQYVGEIGKKYLPIELRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205694 for 3009 contacts (-68.4/contact) +
2D Compatibility (PS) -37389 + (NN) -12142 + (LL) 4344
1D Compatibility (HY) -24400 + (ID) 6600
Total energy: -281881.0 ( -93.68 by residue)
QMean score : 0.530
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