Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDCIFCKIVRGEIPSAKVYEDDEVYAFLDLGQVTEGHTLVIPKKHARNTFDLPDETAAELFRRVPKIARALKEALP-IQGLNILNNNEEVAFQSVFHCHIHLIPRYSKSDDFGLKWKDNADWYTQERYQEIAELIAAKVD
3O1C Chain:A ((15-122))
-GDTIFGKIIRKEIPAKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMI-VGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMN-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3O1C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48626 for 753 contacts (-64.6/contact) +
2D Compatibility (PS) -11498 + (NN) -5332 + (LL) 2692
1D Compatibility (HY) -6000 + (ID) 1700
Total energy: -70464.0 ( -93.58 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_3O1C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O1C-query.scw
PDB file :
Tito_Scwrl_3O1C.pdb
: