Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKQYDYIVIGGGSAGSGTANRAAMYGAKVLLIEGGQ---------VGGTCVNLGCVPKKIMWYGAQVSETLHKYSS-GYGFEVNNLNFDFTTLKANRDAYVQRSRQSYAANFERNGVEKIDGFARFIDNHTIEVNGQQYKAPHIT-----IATGGHPLYPDIIGS-ELGETSDDFFGWETLPDSILIVGAGYIAAELAGVVNELGVETHLAFRKDHILRGFDDMVTSEVMAEMEKSGISLHANHVPKSLKRDEGGKLIFEAENGKT--LVV--------------DRVIWAIGRGPNVDMGL-ENTDIVLNDKGYIKTDEFENTSVDGVYAIGDVN-GKIALTPVAIAAGRRLSERLFNHKDNEKLDYHNVPSVIFTHPVIGTVGLSEAAAIEQFGEDNIKVYTSTFTSM-YTAVTTNRQAVKMKLITLGKEE-KVIGLHGVGYGIDEMIQGFSVAIKMGATKADFDDTVAIHPTGSEEFVTMR |
| 2X8G Chain:A ((108-581)) | ----YDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVR-SILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLK----VVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGA-TELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTTLH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227078 for 3622 contacts (-62.7/contact) +
2D Compatibility (PS) -47253 + (NN) -5636 + (LL) 248
1D Compatibility (HY) -35600 + (ID) 8750
Total energy: -324069.0 ( -89.47 by residue)
QMean score : 0.473
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