Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIICKTPRELGIMREAGRIVALTHEELKKHIKPGISTKELDQIAERFIKKQGAIPSFKGYNGFRGSICVSVNEELVHGIPGSRVLKDGDIISIDIGAKLNGYHGDSAWTYPVGNISDDDKKLLEVTEESLYKGLQEAKPGERLSNISHAIQTYVENEQFSVVREYVGHGVGQDLHEDPQIPHYGPPNKGPRLKPGMVLAIEPMVNAGSRYVKTLADNWTVVTVDGKKCAHFEHTIAITETGFDILTRV
4U76 Chain:A ((59-293))
------------MRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVVRSYCGHGIHKLMHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGCEILTR-
General information:
TITO was launched using:
RESULT:
Template:
4U76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93169 for 2085 contacts (-44.7/contact) +
2D Compatibility (PS) -25898 + (NN) -13403 + (LL) 1252
1D Compatibility (HY) -14800 + (ID) 4750
Total energy: -150768.0 ( -72.31 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_4U76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U76-query.scw
PDB file :
Tito_Scwrl_4U76.pdb
: