Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRGLVRFFFSI----LAVGALITSIVGFALKWGEY-----RGLFLTFEAGQIFSVLFW---------FIGVGMIFSVISQMGFFV--FLTVHRFALEILRSSSLW---NLLQLFFILFVAFDLMYVRFLFFGESG---------ESLAGYAWLPVFLLIFGVITA-------YIKQKQSSKKTFVSSLFLMVVITALEWFPALRVNDEDWLYLMLFPLMACNAFQLLMLPKFAAK--------------------- |
| 2XQH Chain:A ((23-280)) | SDAKASGEFSVAVGNGARATEKASTAVGSWAAADGKQSTALGVGTYAYANASTALGSVAFVDNTATYGTAAGNRAKVDKDATEGTALGAKATVTNKNSVALGANSVTTRDNEVYIGYKTGTESDKTYGTRVLGGLSDGTRNSDAATVGQLNRKVGGVYDDVKARITVESEKQKKYTDQKTSEVNEKVEARTTVGVDSDGKLTRAEGATKTIAVNDGLVALSGRTDRIDYAVGAIDGRVTRNTQSIEKNSKAIAANTRT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163384 for 1211 contacts (-134.9/contact) +
2D Compatibility (PS) -20272 + (NN) 4108 + (LL) 0
1D Compatibility (HY) 14400 + (ID) 1500
Total energy: -166648.0 ( -137.61 by residue)
QMean score : 0.003
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