Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGR-------------------------------GRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVDAVGTMDEVFARALRALGK
1E4V Chain:A ((1-182))
MRIILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEA----GINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYY--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1E4V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43675 for 1128 contacts (-38.7/contact) +
2D Compatibility (PS) -16740 + (NN) -12681 + (LL) 2684
1D Compatibility (HY) -14800 + (ID) 3650
Total energy: -88862.0 ( -78.78 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_1E4V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E4V-query.scw
PDB file :
Tito_Scwrl_1E4V.pdb
: