Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGPAWRDAADVVVIGTGVAGLAAALAADRAGRSVVVLSKAAQT--HVTATHYAQGGIAVVLPD-NDDSVDAHVADTLAAGAGLCDPDAVYSIVADGYRAVTDLVGAGARLDESVPGRWALTREGGHSRRRIVHAGG---------DATGAEVQRAL--QDAAGMLDIRTGHVALRVLHDGTAVTGLLVVRPDGCGI--ISAPSVILATGGLGHLYSATTNPAGSTGDGIALGLWAGVAVSDLEFIQFHPTMLFAGRAGGRRPLITEAIRGEGAILVDRQGNSITAGVHPMG-DLAPRDVVAAA-----IDARLKATGDPCVYLDARGI--EGFASRFPTVTASCR-AAGIDPVRQPIPVVPGAHYSCGGIVTDVYGQ----------TELLGLYAAGEVARTGLHGANRLASNSLLEGLVVGGRAGKAAAAHAAAAGRSRATSSATWPEPISY------------TALDRGDLQRAMSRDASMYR----AAAGLHRLCDSLSGAQVRDVACRR----------DFEDVALTLVAQSVTAAALARTESRGCHHRAEYPCTVPEQARSIVVRGADDANAVCVQALVAVC |
3VR8 Chain:E ((41-593)) | --------AYDVVIIGAGGAGLRAAMGLGEAGFKTAVVTKMFPTRSHTTA---AQGGINAALGSMNPDDWKWHFYDTAKGSDWLGDQNAMHYLTRNAVEAVTELENFGMPFSRTPEGKIYQRSFGGQSNN--YGKGGVAKRTCCVADRTGHSMLHTLYGNSLRCHCTFFIEYFALDLLMDKGRCVGVIALCLEDGTIHRFRSKRTIVATGGYGRAYFSCTTAHMNTGDGTALATRAGIALEDLEFIQFHPTGIY-----GVGCLITEGSRGEGGFLVNSEGERFMERYAPKAKDLASRDVVSRAETIEIMEGRGVGPEKDHIYLQLHHLPAEQLHQRLPGISETAKIFAGVDVTKEPIPVIPTVHYNMGGIPTNYKAQVIKYTKEGGDKIVPGLYACGECACHSVHGANRLGANSLLDAVVFGRACSINIKEELKPDEKIPELPEGAGEESIANLDAVRYANGDVPTAELRLTMQKTMQKHAGVFRRGDILAEGVKKMMD-LSKELKRLKTTDRSLIWNSDLTESLELQNLMLNATQTIVAAENRKESRGAHARDDFPKREDEYDYSKPIEG---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235359 for 4449 contacts (-52.9/contact) +
2D Compatibility (PS) -52111 + (NN) -15345 + (LL) 2536
1D Compatibility (HY) -21200 + (ID) 8800
Total energy: -330279.0 ( -74.24 by residue)
QMean score : 0.398
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