Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTVAAYAAMSATE--PLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQ-PNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTY-NSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWN-A-GANTRVAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDGLRLGAKSYYATADPD-TFRKLRGGFDLILNTVSANL--DLGQYLNLLDVDGTLVELGIPEHP--MAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEI-E-LIEPDYINDAYERVLASDVRYRFVIDISAL |
4OAQ Chain:A ((6-363)) | PDKFQGFAVSDPKNWNRPKLASYERKQINPHDVVLKNEVCGLCYSDIHTLSAGWQPLQRDNLVVGHEIIGEVIAVGDEVTEFKVGDRVGIGAASSSCRSCQRCDSDNEQYCKQGAATYNSKDVRSNNYVTQGGYSSHSIADEKFVFAIPEDLPSSYGAPLMCAGITVFSPLIRNLGLDARGKNVGIIGIGGLGHLALQFANAMGANVTAFSRSSSKKEQAMKLGAHDFVATGEDKTWYKNYDDHFDFILNCASGIDGLNLSEYLSTLKVDKKFVSVGLPPSEDKFEVSPFTFLQQGASFGSSLLGSKTEVKEMLNLAAKHNVRPMIEEVPISEENCAKALDRCHAGDVRYRFVFTDFD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OAQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215511 for 3104 contacts (-69.4/contact) +
2D Compatibility (PS) -37370 + (NN) -16939 + (LL) 176
1D Compatibility (HY) -24000 + (ID) 6800
Total energy: -300444.0 ( -96.79 by residue)
QMean score : 0.477
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