Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHFARHGAGIQHPVIVRGDGVTIFDDRGKSYLDALSGLFVVQVGYGRAELAEAAARQAGTLGYFPLWGYATPPAIELAERL--ARYAPGDLNRVFFTSGGTEAVETAWKVAKQYFKLTGKPGKQKVISRSIAYHGTTQGALAITGLPLFKAPFEPLTPGGFRVPNTNFYRAPLHTDLKEFGRWAADRIAEAIEFEGPDTVAAVFLEPVQNAGGCIPAPPGYFERVREICDRYDVLLVSDEVICAFGRIGSMFACEDLGYVPDMITCAKGLTSGYSPLGAMIASDRLFEPFNDGETMFAHGYTFGGHPVSAAVGLANLDIFER----EGLSDHVKRNSPALRATLEKLYDLPIVGDIRGEGYFFGIELVKDQATKQTFTDDERARLLGQVSAALFEAGLYCRTDDRGDPVVQVAPPLISGQPEFDTIETILRSVLTDTGRKYLHL |
| 2PB0 Chain:A ((44-361)) | ---------------VKGKGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETL-WHTSNVFTNEPALRLGRKLIDATFA----ERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLH---------------------AVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGF-PVSAMLTTQEIASAF---------GSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQ---FDIFSDIRGMGLLIGAEL----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173653 for 2644 contacts (-65.7/contact) +
2D Compatibility (PS) -33710 + (NN) -20014 + (LL) 7860
1D Compatibility (HY) -20000 + (ID) 5500
Total energy: -245017.0 ( -92.67 by residue)
QMean score : 0.471
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