Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTADLHAILEQ----HRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHTSSGGSIYGTPPEYPTPETAPTDPA-SPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRVSADVGGGLRFNIGTGKETSDRQLHSAVAAAVGGPDDPEFHPPRLG--DLKRSCLDIGLAERVLGWRPQIELADGVRRTVEYFRHKHTD |
| 2Q1W Chain:A ((23-316)) | -KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR---EHLKDHPNLTFVEGSI--AD-HALVNQLIGDLQPDAVVHTAASY---KDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYL----EYSGLDFVTFRLANVVGPRN----VSGPLPIFFQRLSEGKKCFV---TKARRDFVFVKDLARATVRAVDGVGHGA-YHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144848 for 2474 contacts (-58.5/contact) +
2D Compatibility (PS) -31094 + (NN) -16389 + (LL) 964
1D Compatibility (HY) -13600 + (ID) 5350
Total energy: -210317.0 ( -85.01 by residue)
QMean score : 0.531
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