Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALVVQKYGGSSVADAERIRRVAERIVATKKQGNDVVVVVSAMGDTTD-------DLLDLAQQVC--------------------P------------------APPPRELDMLLTAGERISNALVAMAIESLGAHARSFTGSQAGVITTGTHGNAKIIDVTPGRLQTALEEGRVVLVAGFQGVSQDTKDVTTLGRGGSDTTAVAMAAALGADVCEIYTDVDGIFSADPRIVRNARKLDTVTFEEMLEMAACGAKVLMLRCVEYARRHNIPVHVRSSYSDRP-GTVVVGSIKDVPMEDPILTGVAHDRSEAKVTIVGLPDI--PGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGPAAVEKL-DSLRNEIGFSQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TSEIRISVLCRDTELDKAVVALHEAFGLGGDEEATVYAGTGR |
| 3TVI Chain:A ((4-438)) | --IVVTKFGGSSLADSNQFKKVKGIIDSD---ANRKYIIPSAPGKRTNKDYKITDLLYLCNAHVKNGIPFDDVFKLISQRYTEIVSELNIDMDIAYYLEKVKKNIENGASSDYAASRGEYLNGVILAKYLNAEFID-----AAEV-IFFDK---CFDE-KKSYEKIKEKVLSCNKAVIPGFYGSSF-NGDVKTFSRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKTISKISYKELRELSYM----LHEEAIFPVKDSGIPINIKNTNKPSDPGTLILSDTHK-EINLGTITGIAGKKNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPSGVD-------SVSLVIEDCKLDGKCDKIIEEIKKQCNPDSIEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSSEINVIVGVETVDFEKAVKSIYNAFN--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TVI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250140 for 3083 contacts (-81.1/contact) +
2D Compatibility (PS) -41759 + (NN) -26831 + (LL) 1924
1D Compatibility (HY) -23200 + (ID) 4250
Total energy: -344256.0 ( -111.66 by residue)
QMean score : 0.472
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