Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPDIRCIAVVGTGAMGTGIAQIAAQAGLTVWLFDSRAEAAAEARQRLRQTFESLCGKGKLSAADAEAAQNRLRVAERLEQLGDCELVVEAIVERLEAKQELLRRLEAIVAPESILASNTSSLSITAIAAACERPQRVAGFHFFNPVPLMRVVEVVDGLASAPEVGDALLALAARLGHRGVRTKDSPGFIVNHAGRAYGTEALRILGEGVAECAEIDRVLRECAGFRMGPFELLDLTGLDVSHPVMESIYQQYYQEPRYRPHPLTRQLLAAGRLGRKSGQGFYRYVDGQPQDKPGPQPVPQAAARPPVWLGCENEDDRRTLAELLHRLGVEPETGERPSAAALCLLAAWGEDLSSAVQRFACPAERSVGIDLLCDLERRRCLMLSPLTAPAMRDAAHALLAGDGVGVTVLRDSPGFVVQRVLAMIVNLACDIAQQGIA-SVEDIDQAVHLGLGYPH---GPLEWGDRLGPRRLLSILQRLQALTG-DPRYRPSPWLRRRAQLGMSLRAGETAAVD |
| 3K6J Chain:A ((52-441)) | -YDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVM---YAREKSFKRLNDKRIEKINANLKITSDFHKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT-NFGFLMGPMTVADMNGFDVMEKLKKEN--------GLEPNPIEKEMWRLKRYGRKTNKGFYKYDDKTQRKE--NDT-------E-M----------EQI------------------IR---------------------RV--------------------------------------AKSNIQ--IINDQDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGGPMRFGKTEGLDKIANMLVHWSSLEPKESAYIVADALKTAN--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209426 for 3104 contacts (-67.5/contact) +
2D Compatibility (PS) -41614 + (NN) -21958 + (LL) 9260
1D Compatibility (HY) -29200 + (ID) 4450
Total energy: -297388.0 ( -95.81 by residue)
QMean score : 0.562
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