Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MELFKEFTFESAHRL--------PHVPEGHKCGRL--HGHSFRVAIHIEGEVDPHTGWIRDFAEIKAIFKP-IYEQLDHNYLND-IPGLEN--PTSENLCRWIWQQLKPLLPE--LSKVRVHETCTSGCEYRGD
1B66 Chain:A ((3-140))
LRRRARLSRLVSFSASHRLHSPSLSAEENLKVFGKCNNPNGHGHNYKVVVTIHGEIDPVTGMVMNLTDLKEYMEEAIMKPLDHKNLDLDVPYFADVVSTTENVAVYIWENLQRLLPVGALYKVKVYETDNNIVVYKGE
General information:
TITO was launched using:
RESULT:
Template:
1B66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74920 for 799 contacts (-93.8/contact) +
2D Compatibility (PS) -12504 + (NN) -3809 + (LL) 0
1D Compatibility (HY) -11600 + (ID) 2100
Total energy: -104933.0 ( -131.33 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_1B66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B66-query.scw
PDB file :
Tito_Scwrl_1B66.pdb
: