Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHKVSATLLIIDDDEVVRESLAAYLEDSNFKVLQALNGLQGLQIFESEQPDLVICDLRMPQIDGLELIRRIRQTASETPIIVLSGAGVMSDAVEALRLGAADYLIKPLEDLAVLEHSVRRALDRAYLRVENQRYRDKLEAANRELQASLNLLQEDQNAGRQVQMNMLPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINTKLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLPVGLFDDATYDDRVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVFGLANLAEMPDDIALLVLSRNLA |
1QKK Chain:A ((5-120)) | -----PSVFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFA-ADRLVQSARRAE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QKK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112071 for 938 contacts (-119.5/contact) +
2D Compatibility (PS) -12887 + (NN) -10572 + (LL) 18092
1D Compatibility (HY) -7200 + (ID) 1950
Total energy: -126588.0 ( -134.96 by residue)
QMean score : 0.656
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