Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKDA----GVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
3SR0 Chain:B ((1-178))
MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPKHGNV---IFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPP-------PGVKVIQREDDKPEVIKKRLEVYREQTAPLIEYYKK-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3SR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69117 for 1265 contacts (-54.6/contact) +
2D Compatibility (PS) -18951 + (NN) -7646 + (LL) 2424
1D Compatibility (HY) -18000 + (ID) 4450
Total energy: -115740.0 ( -91.49 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_3SR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SR0-query.scw
PDB file :
Tito_Scwrl_3SR0.pdb
: