Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEADYLVIGAGIAGASTGYWLSAHG-RVVVLEREAQPGYHSTGRSAAHYTVAYG---TPQVRALTAASRAFFDNPPAGFCEH---P-LLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAGSYRAAVLVNAAGAWCDAIAGLAGVRPLGLQPKRRSAFIFAPPPGIDCHDWPMLVSLDESFYLKPDA-G-MLLGSPANADPVEAHDVQPEQLDIATGMYLIEEATTLTIRRPEHTWAGLRSFVADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIRHQPLP-AHLREHGLDEAMLSPRRLSP |
| 1RYI Chain:A ((16-377)) | -RHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT-MGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSE--EDVLQL-RQMD-DLDSVSWYSKEEVLEKEPYASG-DIFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSGDVWANHVVVASGVWSGMFFKQLGLN-NAFLPVKGECLSVWNDDIP---LTKTLY--HDHCYIVPRKSGRLVVGATMKPGDWSE-TPDLGGLESVMK-KAKTMLPAIQNMKVDRFWAGLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMNKEVNQDWLH-------AFRIDRK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179416 for 3076 contacts (-58.3/contact) +
2D Compatibility (PS) -37055 + (NN) -9244 + (LL) 712
1D Compatibility (HY) -12000 + (ID) 2800
Total energy: -239803.0 ( -77.96 by residue)
QMean score : 0.452
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