Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEQTPEQPSTAPNPALQRQRASQLAQALRTELQKALIGQGAVIDDVLTALLA--GGHVLVEGVPGLGKTLLVRALARCFDGGF-----ARIQFTPDLMPSDVTGHAVYDLASEQFKLRKGPVFTHLLLADEINRAPAKTQAALLEVMQERQVTLEGRALPVPQPFMVLATQNPIEQEGTYPLPEAELDRFMLKLRIDYPAEAEEQTLVRQVTRSARSDMLDVANLRPLLKDKDVLALQRIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGGEFVVPDDIKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPRV |
1SXJ Chain:C ((12-239)) | ---------------------NLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFA--STRQIFS--KGFKLIILDEADAMTNAAQNALRRVIERYT-----------KNTRFCVLANYAH-----KLTPALLSQCTR-FRFQPLPQEAIERRIANVLVH---------------------------EKLKLSPNAEKALIELSNG-----------DMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAP---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121619 for 1676 contacts (-72.6/contact) +
2D Compatibility (PS) -23627 + (NN) -5017 + (LL) 7320
1D Compatibility (HY) -2000 + (ID) 2150
Total energy: -147093.0 ( -87.76 by residue)
QMean score : 0.333
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