Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRDLTDDVALMRPVIDALRASGCDPDRVLVRVGLPPGGLPAGRFPHSAQNLFWKAAADECGEEHVGLHLAEHLPAFHGLLLEYLFLSSDTFGAGLRHSLRYVRLLSDTLQAQLEVEGERAVLSLGESPAINRHFPEMLAGAVIRLFGALTEGEFKPLEVQLMNETGAPMERYRAVYGCPTILGMPRYALVFDAAVLDKPSRHAAPELLRMHESLARRQLAEVERLDLVRQVRELIGELLVDGGATLEQVAARLGMPARRLRERLAMA-GVRFNDLVTDYRCRLAKELLLKTDERIEVIVERTGFSEPSTFYRAFKRWVGETPVEFRRRGQQGRG--------- |
1D5Y Chain:A ((1-123)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QAGIIRDLLIWLEGHL--DQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1D5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -29125 for 704 contacts (-41.4/contact) +
2D Compatibility (PS) -11735 + (NN) -5336 + (LL) 16116
1D Compatibility (HY) -2400 + (ID) 1350
Total energy: -33830.0 ( -48.05 by residue)
QMean score : 0.673
|
|
|