Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRIG--TACGSGLGSSFMVQMNIESILKDLGVSDVEVEHYDLGGADP-------SAADVWIVGRDLEDSAGHLGDVRILNSIIDMDELRELVTGICQEKGLI
2R4Q Chain:A ((171-235))
--KILAVTACPTG--HTFMAADALKEKAKELGVE-IKVETNGSSGIKHKLTAQEIEDAPAIIVAADKQ-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2R4Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13783 for 306 contacts (-45.0/contact) +
2D Compatibility (PS) -6295 + (NN) -4991 + (LL) 2668
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -24901.0 ( -81.38 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_2R4Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R4Q-query.scw
PDB file :
Tito_Scwrl_2R4Q.pdb
: